Search results for " virology"

showing 10 items of 127 documents

Host dispersal shapes the population structure of a tick-borne bacterial pathogen

2020

Birds are hosts for several zoonotic pathogens. Because of their high mobility, especially of longdistance migrants, birds can disperse these pathogens, affecting their distribution and phylogeography. We focused on Borrelia burgdorferi sensu lato, which includes the causative agents of Lyme borreliosis, as an example for tick-borne pathogens, to address the role of birds as propagation hosts of zoonotic agents at a large geographical scale. We collected ticks from passerine birds in 11 European countries. B. burgdorferi s.l. prevalence in Ixodes spp. was 37% and increased with latitude. The fieldfare Turdus pilaris and the blackbird T. merula carried ticks with the highest Borrelia prevale…

0106 biological sciences0301 basic medicineBORRELIA-BURGDORFERIACARImedicine.disease_causemigrationBURGDORFERI SENSU-LATO01 natural sciencesSongbirdsLyme diseaseTicksAcariMigration11832 Microbiology and virologyLyme DiseasebiologyPlan_S-Compliant_NOBLACKBIRDS TURDUS-MERULAPREVALENCEEuropehost-parasite interactionsMIGRATORY BIRDSinternational1181 Ecology evolutionary biology[SDE]Environmental SciencesHost-paraste InterationsHost-parasite interactionsAvesTRANSMISSIONZoology010603 evolutionary biologyticksBirds03 medical and health sciencesBorreliaparasitic diseasesGeneticsmedicineAnimalsHumansBorrelia burgdorferiEcology Evolution Behavior and SystematicsLyme borreliosisInfecções Sistémicas e ZoonosesIxodesBird DiseasesBorreliaLYME-DISEASEIXODES-RICINUS TICKSBorrelia gariniiEcologíabiology.organism_classificationmedicine.diseasebacterial infections and mycoses030104 developmental biologybirdsCandidatusWILD BIRDSMultilocus sequence typingBorrelia gariniiIxodesMultilocus Sequence Typing
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Loop Mediated Isothermal Amplification: Principles and Applications in Plant Virology

2020

In the last decades, the evolution of molecular diagnosis methods has generated different advanced tools, like loop-mediated isothermal amplification (LAMP). Currently, it is a well-established technique, applied in different fields, such as the medicine, agriculture, and food industries, owing to its simplicity, specificity, rapidity, and low-cost efforts. LAMP is a nucleic acid amplification under isothermal conditions, which is highly compatible with point-of-care (POC) analysis and has the potential to improve the diagnosis in plant protection. The great advantages of LAMP have led to several upgrades in order to implement the technique. In this review, the authors provide an overview r…

0106 biological sciences0301 basic medicineBst DNA polymeraseComputer scienceLoop-mediated isothermal amplificationSettore BIO/05 - ZoologiaviroidsPlant VirologyPlant ScienceReviewvirus01 natural sciences03 medical and health sciencesLAMPplant virologyprimersEcology Evolution Behavior and SystematicsEcologyviroid<i>Bst</i> DNA polymeraseBotanySettore AGR/12 - Patologia Vegetalereal-time monitoringeye diseasesDiagnosis methodsVisualizationprimer030104 developmental biologyQK1-989viruBiochemical engineeringloop-mediated isothermal amplification010606 plant biology & botanyPlants
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Ultraviolet radiation accelerates photodegradation under controlled conditions but slows the decomposition of senescent leaves from forest stands in …

2019

Depending on the environment, sunlight can positively or negatively affect litter decomposition, through the ensemble of direct and indirect processes constituting photodegradation. Which of these processes predominate depends on the ecosystem studied and on the spectral composition of sunlight received. To examine the relevance of photodegradation for litter decomposition in forest understoreys, we filtered ultraviolet radiation (UV) and blue light from leaves of Fagus sylvatica and Bettda pendula at two different stages of senescence in both a controlled-environment experiment and outdoors in four different forest stands (Picea abies, Pagus sylvatica, Acer platanoides, Betula pendula). Co…

0106 biological sciences0301 basic medicineCanopyUltraviolet RaysPhysiologyUV-B RADIATIONPlant ScienceForestsANTHOCYANINS01 natural sciencesUV radiationBOREAL FOREST03 medical and health scienceschemistry.chemical_compoundFagus sylvaticaPhotodegradationGeneticsPhotodegradationEcosystemFinlandComputingMilieux_MISCELLANEOUS11832 Microbiology and virologyFlavonoidsSunlight[SDV.EE]Life Sciences [q-bio]/Ecology environment4112 ForestryPhotolysisbiologyChemistryTEMPERATEPLANT LITTERPicea abies15. Life on landPlant litterbiology.organism_classificationPhenolic compoundsUnderstorey light environmentSODANKYLAPlant LeavesHorticultureLIGHT030104 developmental biology13. Climate actionBetula pendulaChlorophyllPATTERNS1182 Biochemistry cell and molecular biologyLEAF-LITTER DECOMPOSITION010606 plant biology & botany
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Chaenothecopsis schefflerae (Ascomycota: Mycocaliciales): a widespread fungus on semi-hardened exudates of endemic New Zealand Araliaceae

2017

Ascomycetes specialised to live on hardened plant exudates occur worldwide, but the number of species so far described is relatively small (c.30). Particularly within the genus Chaenothecopsis (Ascomycota:Mycocaliciales), many species produce their ascomata on hardened but still relatively fresh outpourings of conifer resin or angiosperm exudate. Temperate rainforests of New Zealand provide habitat for several endemic Chaenothecopsis species, including Chaenothecopsis schefflerae, which was previously known from a single sample collected from the exudate of Schefflera digitata (Araliaceae) in the early 1980s. Here we show that C.schefflerae is neither lost nor very rare, but occurs sporadic…

0106 biological sciences0301 basic medicineExudateRIBOSOMAL DNA-SEQUENCESPHYLOGENYkotelosienetMODELSUusi-SeelantiPlant SciencePseudopanax010603 evolutionary biology01 natural sciences03 medical and health sciencesresinicolous fungiNOV.GenusBotanymedicine1183 Plant biology microbiology virologyEcology Evolution Behavior and SystematicsIDENTIFICATIONbiologyMycocaliciumHUMBOLDTENSISexudate15. Life on land030108 mycology & parasitologybiology.organism_classificationPseudopanaxScheffleraScheffleraNEW-CALEDONIAAscocarp1181 Ecology evolutionary biologySchefflera digitatata1181AraliaceaeType specimenmedicine.symptomNew ZealandNew Zealand Journal of Botany
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Arabidopsis mutant dnd2 exhibits increased auxin and abscisic acid content and reduced stomatal conductance

2019

Arabidopsis thaliana cyclic nucleotide-gated ion channel gene 4 (AtCNGC4) loss-of-function mutant dnd2 exhibits elevated accumulation of salicylic acid (SA), dwarfed morphology, reduced hypersensitive response (HR), altered disease resistance and spontaneous lesions on plant leaves. An orthologous barley mutant, nec1, has been reported to over-accumulate indole-3-acetic acid (IAA) and to exhibit changes in stomatal regulation in response to exogenous auxin. Here we show that the Arabidopsis dnd2 over-accumulates both IAA and abscisic acid (ABA) and displays related phenotypic and physiological changes, such as, reduced stomatal size, higher stomatal density and stomatal index. dnd2 showed i…

0106 biological sciences0301 basic medicineHypersensitive responseStomatal conductanceDrought stressPhysiologyMutantArabidopsisPlant ScienceBOX PROTEIN TIR101 natural sciencesSIGNALING PATHWAYS03 medical and health scienceschemistry.chemical_compoundBarley nec1Abscisic acidAuxinGene Expression Regulation PlantArabidopsisLESION MIMIC MUTANTSGeneticsDISEASE RESISTANCEAuxinPLANTAbscisic acid1183 Plant biology microbiology virologyGENE-EXPRESSION2. Zero hungerchemistry.chemical_classificationbiologyIndoleacetic AcidsAbiotic stressArabidopsis Proteinsfungifood and beveragesGATED ION CHANNELSHordeumbiology.organism_classificationDroughts030104 developmental biologychemistryArabidopsis dnd2SALT-STRESSPlant StomataBiophysicsINNATE IMMUNITYAIR HUMIDITYSalicylic acid010606 plant biology & botany
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UV-screening and springtime recovery of photosynthetic capacity in leaves of Vaccinium vitis-idaea above and below the snow pack

2019

International audience; Evergreen plants in boreal biomes undergo seasonal hardening and dehardening adjusting their photosynthetic capacity and photoprotection; acclimating to seasonal changes in temperature and irradiance. Leaf epidermal ultraviolet (UV)-screening by flavonols responds to solar radiation, perceived in part through increased ultraviolet-B (UV-B) radiation, and is a candidate trait to provide cross-photoprotection. At Hyytiälä Forestry Station, central Finland, we examined whether the accumulation of flavonols was higher in leaves of Vaccinium vitis-idaea L. growing above the snowpack compared with those below the snowpack. We found that leaves exposed to colder temperature…

0106 biological sciences0301 basic medicineTime FactorsPhotoinhibitionBOREALPhysiologyPlant ScienceForests01 natural sciencesPlant EpidermisAnthocyaninsSoilFlavonolsLOW-TEMPERATURESnowPhotosynthesis1183 Plant biology microbiology virologychemistry.chemical_classificationspring dehardening.CLIMATE-CHANGEbiologyChemistryTemperatureUnderstoreyHorticultureLIGHTSeasonsVacciniumUltraviolet RaysGrowing seasonPhotosynthesisDWARF SHRUB03 medical and health sciencesLEAFPHOTOSYSTEM-IIGenetics[SDV.BV]Life Sciences [q-bio]/Vegetal BiologyVaccinium vitis-idaeaFlavonoidsSpring dehardeningPhotoprotectionSpectral qualityPhotosystem II Protein ComplexPigments Biological15. Life on landEvergreenbiology.organism_classificationPhotosynthetic capacitySUB-ARCTIC HEATHPlant Leaves030104 developmental biology13. Climate actionPhotoprotectionWINTERB RADIATIONArctic browning010606 plant biology & botany
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Arabidopsis RCD1 coordinates chloroplast and mitochondrial functions through interaction with ANAC transcription factors

2019

Reactive oxygen species (ROS)-dependent signaling pathways from chloroplasts and mitochondria merge at the nuclear protein RADICAL-INDUCED CELL DEATH1 (RCD1). RCD1 interacts in vivo and suppresses the activity of the transcription factors ANAC013 and ANAC017, which mediate a ROS-related retrograde signal originating from mitochondrial complex III. Inactivation of RCD1 leads to increased expression of mitochondrial dysfunction stimulon (MDS) genes regulated by ANAC013 and ANAC017. Accumulating MDS gene products, including alternative oxidases (AOXs), affect redox status of the chloroplasts, leading to changes in chloroplast ROS processing and increased protection of photosynthetic apparatus.…

0106 biological sciences0301 basic medicineretrograde signalingChloroplastsArabidopsisPlant BiologyMitochondrion01 natural sciencesElectron Transport Complex IIIGene Expression Regulation PlantArabidopsisOXIDATIVE STRESS-RESPONSETranscriptional regulationCYCLIC ELECTRON FLOWBiology (General)Nuclear proteinANAC transcription factors1183 Plant biology microbiology virologyreactive oxygen speciesbiologyChemistryRETROGRADE REGULATIONGeneral NeuroscienceQRNuclear Proteinsfood and beveragesGeneral MedicinePlants Genetically Modified:Science::Biological sciences [DRNTU]Cell biologyMitochondriaChloroplastviherhiukkasetMedicineSignal transductionmitochondrial functionsResearch ArticleSignal TransductionQH301-705.5SciencemitokondriotGenetics and Molecular BiologyGeneral Biochemistry Genetics and Molecular BiologyPROTEIN COMPLEXESSIGNALING PATHWAYS03 medical and health scienceschloroplastStress PhysiologicalALTERNATIVE OXIDASESkasvitENZYME-ACTIVITIESredox signalingTranscription factorarabidopsis RCD1General Immunology and MicrobiologybiokemiaArabidopsis Proteinsta1182Biology and Life Sciencesbiology.organism_classification030104 developmental biologyCELL-DEATHPLANT-MITOCHONDRIAA. thalianaGeneral BiochemistryRetrograde signalingGENES-ENCODING MITOCHONDRIALproteiinit010606 plant biology & botanyTranscription Factors
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New national and regional bryophyte records, 49

2016

Paper presents couple of new national and regional bryophyte records accross the world, including our new record of Pseudocalliergon lycopodioides in the Carpathians (Czarny Dunajec); the only recent record for the Carpathians.

0106 biological sciencesBryofloraSplachnum ampullaceumEcologyeducationBryology Bryoflora Plant ScienceBryologyPlant Science15. Life on landBiology010603 evolutionary biology01 natural sciencesBryophyte[SDE.BE]Environmental Sciences/Biodiversity and EcologyPseudocalliergonEcology Evolution Behavior and Systematics1183 Plant biology microbiology virology010606 plant biology & botany
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Bryophyte Species Richness on Retention Aspens Recovers in Time but Community Structure Does Not

2014

Green-tree retention is a forest management method in which some living trees are left on a logged area. The aim is to offer ‘lifeboats’ to support species immediately after logging and to provide microhabitats during and after forest re-establishment. Several studies have shown immediate decline in bryophyte diversity after retention logging and thus questioned the effectiveness of this method, but longer term studies are lacking. Here we studied the epiphytic bryophytes on European aspen (Populus tremula L.) retention trees along a 30-year chronosequence. We compared the bryophyte flora of 102 ‘retention aspens’ on 14 differently aged retention sites with 102 ‘conservation aspens’ on 14 d…

0106 biological sciencesEcological Political Economy010504 meteorology & atmospheric sciencesDIVERSITYBiodiversitylcsh:MedicinePlant ScienceBryology01 natural scienceslehtisammaletMICROCLIMATIC GRADIENTSTreesbryophyte diversitysammaletAbundance (ecology)TREE RETENTIONlcsh:Science1183 Plant biology microbiology virologyConservation Scienceforest reestablishmentMultidisciplinaryEcologyEcologyLoggingmetsänkäsittelyForestryAgricultureBiodiversityFINLANDta4112metsätHabitatCommunity EcologyGROWTHResearch ArticleConservation of Natural ResourcesEPIPHYTIC BRYOPHYTESChronosequenceeducationCONSERVATIONForest managementBryophytaBiology010603 evolutionary biologyBOREAL FORESTelvytysPlant-Environment InteractionsEDGES0105 earth and related environmental sciencesPlant Ecologylcsh:REcology and Environmental SciencesBiology and Life SciencesBayes Theorem15. Life on landhakkuualueetREPRODUCTIONta1181lcsh:QBryophyteSpecies richnessmetsänhoitogreen tree retentionAgroecologyPLOS ONE
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Interactive effects between diet and genotypes of host and pathogen define the severity of infection

2012

Host resistance and parasite virulence are influenced by multiple interacting factors in complex natural communities. Yet, these interactive effects are seldom studied concurrently, resulting in poor understanding of host-pathogen-environment dynamics. Here, we investigated how the level of opportunist pathogen virulence, strength of host immunity and the host condition manipulated via diet affect the survival of wood tiger moth Parasemia plantaginis (Arctidae). Larvae from “low cuticular melanin” and “high cuticular melanin” (considered as low and high pathogen resistance, respectively) selection lines were infected with moderately and highly virulent bacteria strains of Serratia marcescen…

0106 biological sciencesGenotype-environment interactionVirulenceLactucaBiology010603 evolutionary biology01 natural sciencesMicrobiologyMelanin03 medical and health sciencesImmunityParasemia plantaginisBotanyPathogenEcology Evolution Behavior and SystematicsSerratia marcescens030304 developmental biologyNature and Landscape ConservationOriginal Research11832 Microbiology and virology0303 health sciencesimmunokompetenssilleimmunocompetenceEcologyintegumentary systemHost (biology)fungivirulenssiPlantago majorbiology.organism_classificationvirulenceSerratia marcescensta1181Parasemia plantaginissense organsGenotyyppi-ympäristö vuorovaikutusEcology and Evolution
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